Emulator

Game Name?
Wiimms Mario Kart Fun 2014-04 (really any recent MKF or CTGP ISO)

Game ID?
RMCE25

What's the problem? Describe what went wrong in few words.
Under JIT64 in Dolphin 4.0-1624, the menu displays two arrows, the top one pointing left and the bottom one pointing right, and they act as the original cups, not as a scrolling menu. All cups display the original tracks.

What did you expect to happen instead?
All cups load properly and are accessible. This bug does NOT occur in JITIL.

What steps will reproduce the problem?

1. Download and extract Wiimms Mario Kart.
2. Copy Mario Kart Wii ISO into the folder.
3. Run create-image.bat or create-image.sh and follow the prompts (AFAIK they do not affect the glitch)
4. Go to the new-image folder and run the ISO in Dolphin.
5. At the 4 profile/"license" selection screen, create a NEW license if necessary.
6. Load the profile, "1 Player", VS, "Solo Race", any character, any vehicle, any drift.

Dolphin 3.5 and 3.5-367 are old versions of Dolphin that have
known issues and bugs, so don't report issues about them and test the
latest Dolphin version first.
Which versions of Dolphin did you test on?
4.0-1624, 4.0.2

Does using an older version of Dolphin solve your issue? If yes, which
versions of Dolphin used to work?
Earlier versions of Dolphin (including 4.0.2) behaved differently, where the menu skips every even-numbered cup and consolidates all valid cups into the first half of the choices. The second half of the choices have glitchy icons and consist of four Mario Circuit choices which load properly. Note that Wiimms Mario Kart 2014-04 reordered the cups as Mushroom, Shell, Flower, Banana, Star, Leaf, Special, Lightning. Note that CTGP patch reordered the cups in column-major order, unlike the original game, which used row-major order. Only Mushroom, Flower, Banana, and Special are accessible.

What are your PC specifications? (including, but not limited to: Operating
System, CPU and GPU)
Intel i5-3570K 4.1 GHz, Nvidia Asus GTX 660, Windows 7 x64

Are you using the 32 or the 64 bit version of Dolphin?
64-bit

Is there any other relevant information? (e.g. logs, screenshots,
configuration files)
http://imgur.com/UiF6Gwn JIT on latest Dolphin
http://imgur.com/0Q4K7D2 JIT on 4.0.2
http://imgur.com/BU7dvzC JITIL on latest Dolphin