Emulator

My bad, forgot to set title

You need EFB to RAM for that screen to display properly. It's already enabled in the GameINI for the Master Quest disc, but no one has done it yet for the VC version.

Any ideas on how to fix the black lines between the textures? It seems that still appears even with EFB to RAM.

Try running at 1x IR?

actually, if it happens in SW renderer it could be a bug in the VC emulator. Meaning, nothing we can do about it. Also, I was unable to see it.

Those screenshots in the IMGUR album are 1x IR.

Look closely at the top left of the medallions spot, you'll see the graphical glitch most clearly there. Happens in most of the emulators, but I'd have to test it in VC to see if that's an inherent glitch, I don't believe it is though.

Here I've outlined the actual glitches, they exist in both GC and VC versions(also, both versions don't have Copy to RAM by default):
http://imgur.com/gallery/MR7dc

Okay, I tested it on console, it's harder to see, but the pixel seam is apparently still there, I think the real issue is that VC should technically be using internal resolutions with multiples of 240i for VC, and 480i for GC, but instead Dolphin assumes it should use normal GC/Wii resolutions.

Is there a way to fix this with the config?

Here's how they look on console(VC):
http://imgur.com/a/gahNZ

So one person(dotzo) helped me get it from VC, and thanks to Jimmie1717, here's how it looks on GC on console:
http://imgur.com/a/AlxSS

Does the GC version emulate as well? Because the glitch is still present in the GC version from the screenshots above.

I'm just not sure you can say it's "Working as intended," since at a minimum both the GC and VC versions of Ocarina of Time have Copy Textures to RAM disabled by default, so both have the issue with Link not showing up in the menu.

https://github.com/dolphin-emu/dolphin/pull/4503